Lineage for d6npia1 (6npi A:471-607)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2949054Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2952704Superfamily d.58.8: Viral DNA-binding domain [54957] (1 family) (S)
  5. 2952705Family d.58.8.1: Viral DNA-binding domain [54958] (3 proteins)
  6. 2952706Protein Epstein barr virus nuclear antigen-1 (ebna1) [54964] (2 species)
    DNA-binding mode differs from that of E2 protein
  7. 2952707Species Epstein-barr virus (strain b95-8) [TaxId:10377] [385181] (5 PDB entries)
  8. 2952711Domain d6npia1: 6npi A:471-607 [366616]
    Other proteins in same PDB: d6npia2
    automated match to d1b3ta_
    protein/DNA complex; complexed with 60q, kw1

    has additional insertions and/or extensions that are not grouped together

Details for d6npia1

PDB Entry: 6npi (more details), 1.5 Å

PDB Description: crystal structure of epstein-barr virus nuclear antigen-1, ebna1, bound to fragments
PDB Compounds: (A:) Epstein-Barr nuclear antigen 1

SCOPe Domain Sequences for d6npia1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6npia1 d.58.8.1 (A:471-607) Epstein barr virus nuclear antigen-1 (ebna1) {Epstein-barr virus (strain b95-8) [TaxId: 10377]}
qggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtalaipq
crltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpapt
cnirvtvcsfddgvdlp

SCOPe Domain Coordinates for d6npia1:

Click to download the PDB-style file with coordinates for d6npia1.
(The format of our PDB-style files is described here.)

Timeline for d6npia1:

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Domains from same chain:
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d6npia2
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Domains from other chains:
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d6npib_