Lineage for d5ymyb_ (5ymy B:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538334Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2538335Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2538336Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2538652Protein Ubiquitin [54238] (9 species)
  7. 2538766Species Human (Homo sapiens) [TaxId:9606] [54239] (307 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2539404Domain d5ymyb_: 5ymy B: [366298]
    automated match to d5emza_

Details for d5ymyb_

PDB Entry: 5ymy (more details)

PDB Description: the structure of the complex between rpn13 and k48-diub
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d5ymyb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5ymyb_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
iqkestlhlvlrlrgg

SCOPe Domain Coordinates for d5ymyb_:

Click to download the PDB-style file with coordinates for d5ymyb_.
(The format of our PDB-style files is described here.)

Timeline for d5ymyb_:

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d5ymya_