SCOPe 2.08: Domain d6iw2d1: 6iw2 D:1-295

Lineage for d6iw2d1 (6iw2 D:1-295)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.10: Viral glycoprotein, central and dimerisation domains [56982] (1 superfamily)
   2 intertwined domains; all-beta and alpha+beta

4. Superfamily f.10.1: Viral glycoprotein, central and dimerisation domains [56983] (2 families)

5. Family f.10.1.0: automated matches [227258] (1 protein)
   not a true family

6. Protein automated matches [227047] (11 species)
   not a true protein

7. Species Yellow fever virus (strain 17d vaccine) [TaxId:11090] [364871] (3 PDB entries)

8. Domain d6iw2d1: 6iw2 D:1-295 [364982]
   Other proteins in same PDB: d6iw2a2, d6iw2b_, d6iw2c_, d6iw2d2, d6iw2e_, d6iw2f_, d6iw2g2, d6iw2h_, d6iw2i_, d6iw2j2, d6iw2k_, d6iw2l_, d6iw2m2, d6iw2n_, d6iw2o_, d6iw2p2, d6iw2q_, d6iw2r_
   automated match to d3p54a1

Details for d6iw2d1

PDB Entry: 6iw2, 2.9 Å

PDB Description: crystal structure of 5a scfv in complex with yfv-17d se in prefusion state

PDB Compounds: (D:) Envelope protein E

SCOPe Domain Sequences for d6iw2d1:

Sequence, based on SEQRES records:

>d6iw2d1 f.10.1.0 (D:1-295) automated matches {Yellow fever virus (strain 17d vaccine) [TaxId: 11090]}
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtndnnlyklhgghvscrvklsaltlkgt

Sequence, based on observed residues (ATOM records):

>d6iw2d1 f.10.1.0 (D:1-295) automated matches {Yellow fever virus (strain 17d vaccine) [TaxId: 11090]}
ahcigitdrdfiegvhggtwvsatleqdkcvtvmapdkpsldisletvaidrpaevrkvc
ynavlthvkindkcpstgeahlaeenegdnackrtysdrgwgngcglfgkgsivacakft
caksmslfevdqtkiqyviraqlhvgakqenwntdiktlkfdalsgsqevefigygkatl
ecqvqtavdfgnsyiaemeteswivdrqwaqdltlpwqsgsggvwremhhlvefepphaa
tirvlalgnqegslktaltgamrvtkdtlyklhgghvscrvklsaltlkgt

Timeline for d6iw2d1:

• d6iw2d1 first appeared in SCOPe 2.07