Lineage for d5z88a1 (5z88 A:3-323)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2370814Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2370815Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2371474Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 2371475Protein automated matches [227017] (44 species)
    not a true protein
  7. 2371786Species Unidentified influenza virus [TaxId:11309] [225763] (6 PDB entries)
  8. 3064675Domain d5z88a1: 5z88 A:3-323 [364737]
    Other proteins in same PDB: d5z88a2
    automated match to d4we4a_
    complexed with gal, sia; mutant

Details for d5z88a1

PDB Entry: 5z88 (more details), 3 Å

PDB Description: crystal structure of h5 hemagglutinin g228s mutant with 3sln from a/chicken/taiwan/0502/2012
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d5z88a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5z88a1 b.19.1.0 (A:3-323) automated matches {Unidentified influenza virus [TaxId: 11309]}
gdricigyhannsttqvdtimeknvtvthaqdilekehngrlcslkgvkplilkncsvag
wllgnpmcdeflnapewsyivekdrpsnglcypgtfnyyeelkhlmsstnqfekiqifpr
sswsnhdassgvssacpyngrssffrnvvwlikknnvyrtitrtynntniedlliiwgih
hpnnaaeqiklyqnpstyvsvgtstlnqrsipeiatrpkvngqssrmeffwtilrpndsi
tfestgnfiapeyaykivkkgdsaimkselsysncdtkcqtpvgainssmpfhnvhpfai
gecpkyvklkklvlatglrni

SCOPe Domain Coordinates for d5z88a1:

Click to download the PDB-style file with coordinates for d5z88a1.
(The format of our PDB-style files is described here.)

Timeline for d5z88a1:

  • d5z88a1 appears in periodic updates to SCOPe 2.07 starting on 2019-02-11

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Domains from same chain:
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d5z88a2