SCOPe 2.08: Domain d6adsa_: 6ads A:

Lineage for d6adsa_ (6ads A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Seneca valley virus [TaxId:390157] [188689] (3 PDB entries)

8. Domain d6adsa_: 6ads A: [364350]
   automated match to d3cjia_

Details for d6adsa_

PDB Entry: 6ads, 2.84 Å

PDB Description: structure of seneca valley virus in acidic conditions

PDB Compounds: (A:) vp1

SCOPe Domain Sequences for d6adsa_:

Sequence, based on SEQRES records:

>d6adsa_ b.121.4.0 (A:) automated matches {Seneca valley virus [TaxId: 390157]}
stdnaetgvieagntdtdfsgelaapgsnhtnvkflfdrsrllnvikvlekdavfprpfp
tatgtqqddgyfclltprptvasrpatrfglyvspsdsgvlantsldfnfyslacftyfr
sdlevtvvslepdlefavgwfpsgseyqassfvydqlhvpyhftgrtprafaskggkvsf
vlpwnsvssvlpvrwggasklssatrglpahadwgtiyafiprpnekkstavkhvavyir
yknarawcpsmlpfrsyk

Sequence, based on observed residues (ATOM records):

>d6adsa_ b.121.4.0 (A:) automated matches {Seneca valley virus [TaxId: 390157]}
stdnaetgvieagntdtdfsgelaapgsnhtnvkflfdrsrllnvikvlekdavfprpfp
tatgtqqddgyfclltprptvasrpatrfglygvlantsldfnfyslacftyfrsdlevt
vvslepdlefavgwfpsgseyqassfvydqlhvpyhftgrtprafaskggkvsfvlpwns
vssvlpvrwggasklssatrglpahadwgtiyafiprpnekkstavkhvavyiryknara
wcpsmlpfrsyk

Timeline for d6adsa_:

• d6adsa_ first appeared in SCOPe 2.07