Lineage for d6c6ca1 (6c6c A:7-185)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2937550Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2937551Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2938649Family d.19.1.0: automated matches [227140] (1 protein)
    not a true family
  6. 2938650Protein automated matches [226842] (5 species)
    not a true protein
  7. 2938889Species Mouse (Mus musculus) [TaxId:10090] [224924] (70 PDB entries)
  8. 2938906Domain d6c6ca1: 6c6c A:7-185 [363124]
    Other proteins in same PDB: d6c6ca2, d6c6cb_
    automated match to d1zt4c2
    complexed with emg, na, nag

Details for d6c6ca1

PDB Entry: 6c6c (more details), 2.08 Å

PDB Description: structure of glycolipid agsa[20,6p] in complex with mouse cd1d
PDB Compounds: (A:) Antigen-presenting glycoprotein CD1d1

SCOPe Domain Sequences for d6c6ca1:

Sequence, based on SEQRES records: (download)

>d6c6ca1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyvv
rfwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d6c6ca1 d.19.1.0 (A:7-185) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
nytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqwekl
qhmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypsesflhvafqgkyvvrfw
gtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d6c6ca1:

Click to download the PDB-style file with coordinates for d6c6ca1.
(The format of our PDB-style files is described here.)

Timeline for d6c6ca1:

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Domains from same chain:
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d6c6ca2
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Domains from other chains:
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d6c6cb_