Lineage for d5z6ba_ (5z6b A:)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. Protein automated matches [190039] (160 species)
    not a true protein
  7. Species Bacillus subtilis [TaxId:224308] [194551] (7 PDB entries)
  8. Domain d5z6ba_: 5z6b A: [362975]
    automated match to d4r6ka_

Details for d5z6ba_

PDB Entry: 5z6b (more details), 1.58 Å

PDB Description: crystal structure of sugar-binding protein yeso in complex with rhamnogalacturonan trisaccharide
PDB Compounds: (A:) Putative ABC transporter substrate-binding protein YesO

SCOPe Domain Sequences for d5z6ba_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5z6ba_ c.94.1.0 (A:) automated matches {Bacillus subtilis [TaxId: 224308]}
tlriawwggqprhdyttkvielyekknphvhieaefanwddywkklapmsaagqlpdviq
mdtaylaqygkknqledltpytkdgtidvssidenmlsggkidnklygftlgvnvlsvia
nedllkkagvsinqenwtwedyeklaydlqekagvygsngmhppdiffpyylrtkgerfy
kedgtglayqddqlfvdyferqlrlvkaktsptpdesaqikgmeddfivkgksaitwnys
nqylgfarltdsplslylppeqmqekaltlkpsmlfsipkssehkkeaakfinffvnnee
anqlikgergvpvsdkvadaikpklneeetniveyvetaskniskadppepvgsaevikl
lkdtsdqilyqkvspekaaktfrkkaneilern

SCOPe Domain Coordinates for d5z6ba_ are not available.

Timeline for d5z6ba_: