Lineage for d6cpmc1 (6cpm C:277-615)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2926589Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2926590Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2927640Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2927641Protein automated matches [190230] (23 species)
    not a true protein
  7. 2927669Species Human (Homo sapiens) [TaxId:9606] [187072] (53 PDB entries)
  8. 2927709Domain d6cpmc1: 6cpm C:277-615 [362683]
    Other proteins in same PDB: d6cpmc2, d6cpmd2, d6cpme_, d6cpmf_
    automated match to d3nhea_
    complexed with ca, edo, gol, na, zn

Details for d6cpmc1

PDB Entry: 6cpm (more details), 2.01 Å

PDB Description: structure of the usp15 deubiquitinase domain in complex with a third- generation inhibitory ubv
PDB Compounds: (C:) ubiquitin carboxyl-terminal hydrolase 15

SCOPe Domain Sequences for d6cpmc1:

Sequence, based on SEQRES records: (download)

>d6cpmc1 d.3.1.0 (C:277-615) automated matches {Human (Homo sapiens) [TaxId: 9606]}
sepgrnneqpglcglsnlgntcfmnsaiqclsntpplteyflndkyqeelnfdnplgmrg
eiaksyaelikqmwsgkfsyvtprafktqvgrfapqfsgyqqqdcqellaflldglhedl
nrirkkpyiqlkdadgrpdkvvaeeawenhlkrndsiivdifhglfkstlvcpecakisv
tfdpfcyltlplpmpkkpfvklkdcielfttkeklgaedpwycpnckehqqatkkldlws
lppvlvvhlkrfsysrymrdkldtlvdfpindldmsgcrynliavsnhyggmggghytaf
aknkddgkwyyfddssvstasedqivskaayvlfyqrqd

Sequence, based on observed residues (ATOM records): (download)

>d6cpmc1 d.3.1.0 (C:277-615) automated matches {Human (Homo sapiens) [TaxId: 9606]}
sepgrnneqpglcglsnlgntcfmnsaiqclsntpplteyflndkyqeelnfdnplgmrg
eiaksyaelikqmwsgkfsyvtprafktqvgrfapqfsgqdcqellaflldglhedlnri
rkkpyiqlkdadgrpdkvvaeeawenhlkrndsiivdifhglfkstlvcpecakisvtfd
pfcyltlplpmpkkpfvklkdcielfttkeklgaedpwycpnckehqqatkkldlwslpp
vlvvhlkrfsysrymrdkldtlvdfpindldmsgcrynliavsnhyggmggghytafakn
kddgkwyyfddssvstasedqivskaayvlfyqrqd

SCOPe Domain Coordinates for d6cpmc1:

Click to download the PDB-style file with coordinates for d6cpmc1.
(The format of our PDB-style files is described here.)

Timeline for d6cpmc1: