Lineage for d5zg0b_ (5zg0 B:)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
  6. Protein Glutamate receptor ligand binding core [53881] (5 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [189807] (8 PDB entries)
  8. Domain d5zg0b_: 5zg0 B: [362572]
    Other proteins in same PDB: d5zg0d2
    automated match to d2xhda_
    complexed with 9c3, act, glu, zn

Details for d5zg0b_

PDB Entry: 5zg0 (more details), 1.58 Å

PDB Description: crystal structure of the glua2o lbd in complex with glutamate and compound-1
PDB Compounds: (B:) Glutamate receptor 2

SCOPe Domain Sequences for d5zg0b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5zg0b_ c.94.1.1 (B:) Glutamate receptor ligand binding core {Human (Homo sapiens) [TaxId: 9606]}
nktvvvttilespyvmmkknhemlegneryegycvdlaaeiakhcgfkykltivgdgkyg
ardadtkiwngmvgelvygkadiaiapltitlvreevidfskpfmslgisimikkgtpie
saedlskqteiaygtldsgstkeffrrskiavfdkmwtymrsaepsvfvrttaegvarvr
kskgkyayllestmneyieqrkpcdtmkvggnldskgygiatpkgsslrnavnlavlkln
eqglldklknkwwydkgecg

SCOPe Domain Coordinates for d5zg0b_ are not available.

Timeline for d5zg0b_:

Domains from other chains:
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d5zg0a_, d5zg0c_, d5zg0d1, d5zg0d2, d5zg0e_, d5zg0f_