Lineage for Species: Ruminococcus gnavus [TaxId: 33038]

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily b.1.4: beta-Galactosidase/glucuronidase domain [49303] (2 families) (S)
  5. Family b.1.4.0: automated matches [254272] (1 protein)
    not a true family
  6. Protein automated matches [254633] (19 species)
    not a true protein
  7. Species Ruminococcus gnavus [TaxId:33038] [361247] (8 PDB entries)

PDB entries in Species: Ruminococcus gnavus [TaxId: 33038]:

  1. Domain(s) for 5z18:
    1. Domain d5z18a2: 5z18 A:186-278 [361287]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    2. Domain d5z18b2: 5z18 B:186-278 [361323]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    3. Domain d5z18c2: 5z18 C:186-278 [361318]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    4. Domain d5z18d2: 5z18 D:186-278 [361275]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    5. Domain d5z18e2: 5z18 E:186-278 [361248]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
    6. Domain d5z18f2: 5z18 F:186-278 [361331]
      Other proteins in same PDB: d5z18a1, d5z18a3, d5z18b1, d5z18b3, d5z18c1, d5z18c3, d5z18d1, d5z18d3, d5z18e1, d5z18e3, d5z18f1, d5z18f3
      automated match to d5c71a2
  2. Domain(s) for 6ec6:
    1. Domain d6ec6a2: 6ec6 A:186-278 [364895]
      Other proteins in same PDB: d6ec6a1, d6ec6a3, d6ec6b1, d6ec6b3
      automated match to d5c71a2
      complexed with cl, gol
    2. Domain d6ec6b2: 6ec6 B:186-278 [364797]
      Other proteins in same PDB: d6ec6a1, d6ec6a3, d6ec6b1, d6ec6b3
      automated match to d5c71a2
      complexed with cl, gol
  3. Domain(s) for 6jz2:
    1. Domain d6jz2a2: 6jz2 A:186-278 [387201]
      Other proteins in same PDB: d6jz2a1, d6jz2a3, d6jz2b1, d6jz2b3
      automated match to d5c71a2
      complexed with mpd, mrd, sj5
    2. Domain d6jz2b2: 6jz2 B:186-278 [387281]
      Other proteins in same PDB: d6jz2a1, d6jz2a3, d6jz2b1, d6jz2b3
      automated match to d5c71a2
      complexed with mpd, mrd, sj5
  4. Domain(s) for 6jz3:
    1. Domain d6jz3a2: 6jz3 A:186-278 [385344]
      Other proteins in same PDB: d6jz3a1, d6jz3a3, d6jz3b1, d6jz3b3
      automated match to d5c71a2
      complexed with cn0, mrd
    2. Domain d6jz3b2: 6jz3 B:186-278 [385434]
      Other proteins in same PDB: d6jz3a1, d6jz3a3, d6jz3b1, d6jz3b3
      automated match to d5c71a2
      complexed with cn0, mrd
  5. Domain(s) for 6jz4:
    1. Domain d6jz4a2: 6jz4 A:186-278 [386460]
      Other proteins in same PDB: d6jz4a1, d6jz4a3, d6jz4b1, d6jz4b3
      automated match to d5c71a2
      complexed with eva, mrd
    2. Domain d6jz4b2: 6jz4 B:186-278 [386459]
      Other proteins in same PDB: d6jz4a1, d6jz4a3, d6jz4b1, d6jz4b3
      automated match to d5c71a2
      complexed with eva, mrd
  6. Domain(s) for 6jz5:
    1. Domain d6jz5a2: 6jz5 A:186-278 [387375]
      Other proteins in same PDB: d6jz5a1, d6jz5a3, d6jz5b1, d6jz5b3
      automated match to d5c71a2
      complexed with bdp
    2. Domain d6jz5b2: 6jz5 B:186-278 [387311]
      Other proteins in same PDB: d6jz5a1, d6jz5a3, d6jz5b1, d6jz5b3
      automated match to d5c71a2
      complexed with bdp
  7. Domain(s) for 6jz6:
    1. Domain d6jz6a2: 6jz6 A:186-278 [387198]
      Other proteins in same PDB: d6jz6a1, d6jz6a3, d6jz6b1, d6jz6b3
      automated match to d5c71a2
      complexed with ckx
    2. Domain d6jz6b2: 6jz6 B:186-278 [387116]
      Other proteins in same PDB: d6jz6a1, d6jz6a3, d6jz6b1, d6jz6b3
      automated match to d5c71a2
      complexed with ckx
  8. Domain(s) for 6jz7:
    1. Domain d6jz7a2: 6jz7 A:186-278 [387122]
      Other proteins in same PDB: d6jz7a1, d6jz7a3, d6jz7b1, d6jz7b3
      automated match to d5c71a2
      complexed with cku
    2. Domain d6jz7b2: 6jz7 B:186-278 [387119]
      Other proteins in same PDB: d6jz7a1, d6jz7a3, d6jz7b1, d6jz7b3
      automated match to d5c71a2
      complexed with cku

More info for Species Ruminococcus gnavus [TaxId:33038] from b.1.4.0 automated matches

Timeline for Species Ruminococcus gnavus [TaxId:33038] from b.1.4.0 automated matches: