SCOPe 2.08: Domain d6gpeb_: 6gpe B:

Lineage for d6gpeb_ (6gpe B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.3: Gab protein (hypothetical protein YgaT) [63855] (2 proteins)
   automatically mapped to Pfam PF08943

6. Protein automated matches [190931] (3 species)
   not a true protein

7. Species Escherichia coli [TaxId:83333] [361103] (2 PDB entries)

8. Domain d6gpeb_: 6gpe B: [361104]
   automated match to d1jr7a_
   complexed with fe2

Details for d6gpeb_

PDB Entry: 6gpe, 2.2 Å

PDB Description: crystal structure of the csid glutarate hydroxylase

PDB Compounds: (B:) Protein CsiD

SCOPe Domain Sequences for d6gpeb_:

Sequence, based on SEQRES records:

>d6gpeb_ b.82.2.3 (B:) automated matches {Escherichia coli [TaxId: 83333]}
ysgftltpsaqsprlleltfteqttkqfleqvaewpvqaleyksflrfrvakilddlcan
qlqplllktllnraegallinavgvddvkqademvklatavahligrsnfdamsgqyyar
fvvknvdnsdsylrqphrvmelhndgtyveeitdyvlmmkideqnmqggnslllhlddwe
hldnyfrhplarrpmrfaappsknvskdvfhpvfdvdqqgrpvmryidqfvqpkdfeegv
wlselsdaietskgilsvpvpvgkfllinnlfwlhgrdrftphpdlrrelmrqrgyfaya
snhyqthq

Sequence, based on observed residues (ATOM records):

>d6gpeb_ b.82.2.3 (B:) automated matches {Escherichia coli [TaxId: 83333]}
ysgftltpsaqsprlleltfteqttkqfleqvaewpvqaleyksflrfrvakilddlcan
qlqplllktllnraegallinavgvddvkqademvklatavahligrsnfdamsgqyyar
fvvknhrvmelhndgtyveeitdyvlmmkideqnmqggnslllhlddwehldnyfrhpla
rrpmrfaappkdvfhpvfdvdqqgrpvmryidqfvqpkdfeegvwlselsdaietskgil
svpvpvgkfllinnlfwlhgrdrftphpdlrrelmrqrgyfayasnhyqthq

Timeline for d6gpeb_:

• d6gpeb_ first appeared in SCOPe 2.07