Lineage for d5zkaa1 (5zka A:1-289)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2420459Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 2421872Family c.1.10.0: automated matches [191319] (1 protein)
    not a true family
  6. 2421873Protein automated matches [190115] (91 species)
    not a true protein
  7. 3060842Species Fusobacterium nucleatum [TaxId:190304] [360904] (2 PDB entries)
  8. 3060922Domain d5zkaa1: 5zka A:1-289 [360984]
    Other proteins in same PDB: d5zkaa2, d5zkab2
    automated match to d3lcgc_
    complexed with edo, pge

Details for d5zkaa1

PDB Entry: 5zka (more details), 1.76 Å

PDB Description: crystal structure of n-acetylneuraminate lyase from fusobacterium nucleatum complexed with pyruvate
PDB Compounds: (A:) n-acetylneuraminate lyase

SCOPe Domain Sequences for d5zkaa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5zkaa1 c.1.10.0 (A:1-289) automated matches {Fusobacterium nucleatum [TaxId: 190304]}

SCOPe Domain Coordinates for d5zkaa1:

Click to download the PDB-style file with coordinates for d5zkaa1.
(The format of our PDB-style files is described here.)

Timeline for d5zkaa1:

  • d5zkaa1 is new in SCOPe 2.07-stable

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