Lineage for d6mvyb1 (6mvy B:1001-1224)

  1. Root: SCOPe 2.08
  2. 3021034Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)
  3. 3023597Fold f.14: Gated ion channels [81325] (2 superfamilies)
    oligomeric transmembrane alpha-helical proteins
  4. 3023598Superfamily f.14.1: Voltage-gated ion channels [81324] (5 families) (S)
    Pfam PF00520
  5. 3023737Family f.14.1.2: Voltage-gated Na/Ca cation channels [310631] (4 proteins)
    Pfam PF08016
  6. 3023750Protein NavAb sodium channel [310744] (1 species)
  7. 3023751Species Arcobacter butzleri [TaxId:367737] [310997] (16 PDB entries)
  8. 3023783Domain d6mvyb1: 6mvy B:1001-1224 [360935]
    Other proteins in same PDB: d6mvya2, d6mvyb2
    automated match to d3rvya_
    complexed with px4, so4

Details for d6mvyb1

PDB Entry: 6mvy (more details), 3 Å

PDB Description: navab voltage-gated sodium channel, residues 1-226, crystallized in the presence of class 1b anti-arrhythmic drug lidocaine
PDB Compounds: (B:) Ion transport protein

SCOPe Domain Sequences for d6mvyb1:

Sequence, based on SEQRES records: (download)

>d6mvyb1 f.14.1.2 (B:1001-1224) NavAb sodium channel {Arcobacter butzleri [TaxId: 367737]}
mylritnivessfftkfiiylivlngitmgletsktfmqsfgvyttlfnqivitiftiei
ilriyvhrisffkdpwslfdffvvaislvptssgfeilrvlrvlrlfrlvtavpqmrkiv
salisvipgmlsvialmtlffyifaimatqlfgerfpewfgtlgesfytlfqvmtlesws
mgivrplmevypyawvffipfifvvtfvminlvvaicvdamail

Sequence, based on observed residues (ATOM records): (download)

>d6mvyb1 f.14.1.2 (B:1001-1224) NavAb sodium channel {Arcobacter butzleri [TaxId: 367737]}
mylritnivessfftkfiiylivlngitmgletsktfmqsfgvyttlfnqivitiftiei
ilriyvhrisffkdpwslfdffvvaislvptseilrvlrvlrlfrlvtavpqmrkivsal
isvipgmlsvialmtlffyifaimatqlfgerfpewfgtlgesfytlfqvmtleswsmgi
vrplmevypyawvffipfifvvtfvminlvvaicvdamail

SCOPe Domain Coordinates for d6mvyb1:

Click to download the PDB-style file with coordinates for d6mvyb1.
(The format of our PDB-style files is described here.)

Timeline for d6mvyb1:

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Domains from same chain:
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d6mvyb2