SCOPe 2.08: Domain d5zdoa1: 5zdo A:1-337

Lineage for d5zdoa1 (5zdo A:1-337)

1. Root: SCOPe 2.08
2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)
5. Family c.26.1.0: automated matches [191377] (1 protein)
   not a true family
6. Protein automated matches [190459] (60 species)
   not a true protein
7. Species Thermus thermophilus [TaxId:300852] [360920] (3 PDB entries)
8. Domain d5zdoa1: 5zdo A:1-337 [360924]
   Other proteins in same PDB: d5zdoa2
   automated match to d4jxxa1
   complexed with cl

Details for d5zdoa1

PDB Entry: 5zdo, 2.8 Å

PDB Description: crystal structure analysis of ttqrs in co-crystallised with atp

PDB Compounds: (A:) Glutamine-tRNA ligase

SCOPe Domain Sequences for d5zdoa1:

Sequence, based on SEQRES records:

>d5zdoa1 c.26.1.0 (A:1-337) automated matches {Thermus thermophilus [TaxId: 300852]}
mglvpecfitelverdlkegkyaklvtrfppepngylhigharsivlnfglaqdyggecn
lrfddtnpetekeeyaraieedvrwlgfrptrvlyasdyfetmyqcalvliqegkayvdd
lpeeemselraqgkpspyrersveenlelfermrrgefptgsrvlrakidpahpnfklrd
pvlyrivhaphyhvgdrwviypmydfahpledfiegvthslctlefennrtvydwvienl
kgkcglptsprphqyefarldlshtvlskrkliklveggyvsgwddprlptlrglrrrgv
rpeaivefvrktgisrneaqiemdlfeevvrddlnpi

Sequence, based on observed residues (ATOM records):

>d5zdoa1 c.26.1.0 (A:1-337) automated matches {Thermus thermophilus [TaxId: 300852]}
mglvpecfitelverdlkegkyaklvtrfppepngylhigharsivlnfglaqdyggecn
lrfddtnpetekeeyaraieedvrwlgfrptrvlyasdyfetmyqcalvliqegkayvdd
lpeeemselraqgkpspyrersveenlelfermrrgefptgsrvlrakidpahpnfklrd
pvlyrivhaphyhvgdrwviypmydfahpledfiegvthslctltvydwvienlkgkcgl
ptsprphqyefarldlshtvlskrkliklveggyvsgwddprlptlrglrrrgvrpeaiv
efvrktgisrneaqiemdlfeevvrddlnpi

SCOPe Domain Coordinates for d5zdoa1 are not available.

Timeline for d5zdoa1:

• d5zdoa1 first appeared in SCOPe 2.07