SCOPe 2.08: Domain d6if1b1: 6if1 B:1-156

Lineage for d6if1b1 (6if1 B:1-156)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.20: UBC-like [54494] (1 superfamily)
   alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2

4. Superfamily d.20.1: UBC-like [54495] (5 families)

5. Family d.20.1.1: UBC-related [54496] (7 proteins)

6. Protein Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain [143063] (2 species)
   ubc1 homologue; also contains the C-terminal UBA domain

7. Species Human (Homo sapiens) [TaxId:9606] [143064] (10 PDB entries)
   Uniprot P61086 1-156

8. Domain d6if1b1: 6if1 B:1-156 [360434]
   Other proteins in same PDB: d6if1a2, d6if1b2, d6if1c_, d6if1d_
   automated match to d3e46a2

Details for d6if1b1

PDB Entry: 6if1, 2.47 Å

PDB Description: crystal structure of ube2k and k48-linked di-ubiquitin complex

PDB Compounds: (B:) Ubiquitin-conjugating enzyme E2 K

SCOPe Domain Sequences for d6if1b1:

Sequence; same for both SEQRES and ATOM records:

>d6if1b1 d.20.1.1 (B:1-156) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Human (Homo sapiens) [TaxId: 9606]}
maniavqrikrefkevlkseetsknqikvdlvdenftelrgeiagppdtpyeggryqlei
kipetypfnppkvrfitkiwhpnissvtgaicldilkdqwaaamtlrtvllslqallaaa
epddpqdavvanqykqnpemfkqtarlwahvyagap

Timeline for d6if1b1:

• d6if1b1 first appeared in SCOPe 2.07