SCOPe 2.08: Domain d6erka_: 6erk A:

Lineage for d6erka_ (6erk A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (166 species)
   not a true protein

7. Species Psychrobacter cryohalolentis [TaxId:335284] [358000] (1 PDB entry)

8. Domain d6erka_: 6erk A: [358001]
   Other proteins in same PDB: d6erkb2
   automated match to d4ah3d_
   complexed with edo, gol, plp, so4

Details for d6erka_

PDB Entry: 6erk, 1.6 Å

PDB Description: crystal structure of diaminopelargonic acid aminotransferase from psychrobacter cryohalolentis

PDB Compounds: (A:) aminotransferase

SCOPe Domain Sequences for d6erka_:

Sequence, based on SEQRES records:

>d6erka_ c.67.1.0 (A:) automated matches {Psychrobacter cryohalolentis [TaxId: 335284]}
mttvstndfdqqhlwhpyaslpptypnividraegiyivtedgtrlidgmsswwasvhgy
nhpklnaamieqlgkmahvmfgglthqpaidlgkkllsivpagldaifyadsgsiaveva
lkmalqyqiaakrpskcqfasthsgyygdtwhamsvcdpingmhslygkqlpmqhfvaap
pmgferdltqserealteffvknsdklagfiiepiiqgaggmrfyspqylqllrklcdey
dvlliadeiatgfgrsgklfacehaaispdimtigkaltggymtfaatlstreiadtisq
sdypalmhgptfmgnplacavacasidlivsydieartenmqaimneqlapavslegvke
vrclgavavielneavdmpifqtllinngiwvrpfgklvyimppyvitddelttlcqall
kvvssyltrk

Sequence, based on observed residues (ATOM records):

>d6erka_ c.67.1.0 (A:) automated matches {Psychrobacter cryohalolentis [TaxId: 335284]}
mttvstndfdqqhlwhpyaslpptypnividraegiyivtedgtrlidgmsswwasvhgy
nhpklnaamieqlgkmahvmfgglthqpaidlgkkllsivpagldaifyadsgsiaveva
lkmalqyqiaakrpskcqfasthsgyygdtwhamsvcdkqlpmqhfvaappmgferdltq
serealteffvknsdklagfiiepiiqgaggmrfyspqylqllrklcdeydvlliadeia
tgfgrsgklfacehaaispdimtigkaltggymtfaatlstreiadtisqsdypalmhgp
tfmgnplacavacasidlivsydieartenmqaimneqlapavslegvkevrclgavavi
elneavdmpifqtllinngiwvrpfgklvyimppyvitddelttlcqallkvvssyltrk

Timeline for d6erka_:

• d6erka_ first appeared in SCOPe 2.07