SCOPe 2.06: Domain d1iuda_: 1iud A:

Lineage for d1iuda_ (1iud A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)

6. Protein D-maltodextrin-binding protein, MBP [53862] (5 species)
   contains a few additional helices in the C-terminal extension; homologous to thiaminase I

7. Species Escherichia coli [TaxId:562] [53863] (65 PDB entries)
   Uniprot P02928

8. Domain d1iuda_: 1iud A: [35786]
   insertion/deletion mutant with an inserted B-cell epitope from hepatitis B virus
   complexed with mal; mutant

Details for d1iuda_

PDB Entry: 1iud, 2.7 Å

PDB Description: maltodextrin-binding protein insertion/deletion mutant with an inserted b-cell epitope from the pres2 region of hepatitis b virus

PDB Compounds: (A:) maltodextrin-binding protein male-b133

SCOPe Domain Sequences for d1iuda_:

Sequence, based on SEQRES records:

>d1iuda_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
egklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwa
hdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllp
nppktweeipdpqdprvrglyfpaggldpgksalmfnlqepyftwpliaadggyafkyen
gkydikdvgvdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwaws
nidtskvnygvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleav
nkdkplgavalksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasg
rqtvdealkdaqtritk

Sequence, based on observed residues (ATOM records):

>d1iuda_ c.94.1.1 (A:) D-maltodextrin-binding protein, MBP {Escherichia coli [TaxId: 562]}
egklviwingdkgynglaevgkkfekdtgikvtvehpdkleekfpqvaatgdgpdiifwa
hdrfggyaqsgllaeitpdkafqdklypftwdavryngkliaypiavealsliynkdllp
nppktweeipdpqdprvrglyksalmfnlqepyftwpliaadggyafkyengkydikdvg
vdnagakagltflvdliknkhmnadtdysiaeaafnkgetamtingpwawsnidtskvny
gvtvlptfkgqpskpfvgvlsaginaaspnkelakeflenylltdegleavnkdkplgav
alksyeeelakdpriaatmenaqkgeimpnipqmsafwyavrtavinaasgrqtvdealk
daqtritk

Timeline for d1iuda_:

• d1iuda_ first appeared (with stable ids) in SCOP 1.55, called d1iud__
  
• d1iuda_ appears in SCOPe 2.05
  
• d1iuda_ appears in SCOPe 2.07
  
• d1iuda_ appears in the current release, SCOPe 2.08