SCOPe 2.08: Domain d6g8nd_: 6g8n D:

Lineage for d6g8nd_ (6g8n D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein automated matches [190144] (14 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (202 PDB entries)

8. Domain d6g8nd_: 6g8n D: [357643]
   Other proteins in same PDB: d6g8na_, d6g8nc2, d6g8ne_, d6g8ng_, d6g8ni_, d6g8nj_, d6g8nk_, d6g8nl_, d6g8nn_, d6g8no_, d6g8nq2, d6g8ns_, d6g8nu_, d6g8nw_, d6g8nx_, d6g8ny_, d6g8nz_
   automated match to d1rype_
   complexed with cl, eqb, mg

Details for d6g8nd_

PDB Entry: 6g8n, 3 Å

PDB Description: yeast 20s proteasome in complex with cystargolide b derivative 2

PDB Compounds: (D:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d6g8nd_:

Sequence, based on SEQRES records:

>d6g8nd_ d.153.1.4 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records):

>d6g8nd_ d.153.1.4 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

Timeline for d6g8nd_:

• d6g8nd_ first appeared in SCOPe 2.07