SCOPe 2.08: Domain d6d1oh_: 6d1o H:

Lineage for d6d1oh_ (6d1o H:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
   one turn of helix is made by two pairs of antiparallel strands linked with short turns
   has appearance of a sandwich of distinct architecture and jelly-roll topology

4. Superfamily b.82.2: Clavaminate synthase-like [51197] (16 families)
   Iron and ketoglutarate-dependent enzymes; elaborated version of this common fold

5. Family b.82.2.0: automated matches [191672] (1 protein)
   not a true family

6. Protein automated matches [191281] (21 species)
   not a true protein

7. Species Sphingobium herbicidovorans [TaxId:1219045] [355990] (2 PDB entries)

8. Domain d6d1oh_: 6d1o H: [356142]
   automated match to d1otja_

Details for d6d1oh_

PDB Entry: 6d1o, 2.7 Å

PDB Description: ft_5 dioxygenase apoenzyme

PDB Compounds: (H:) (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase

SCOPe Domain Sequences for d6d1oh_:

Sequence, based on SEQRES records:

>d6d1oh_ b.82.2.0 (H:) automated matches {Sphingobium herbicidovorans [TaxId: 1219045]}
sqrferiavqpltgvlgaeitgvdlreplddstwneildafhtyqviyfpgqaitneqhi
afsrrfgpvdpvpllksiegypevqmirreanesgrvigenwhtdstfldappaavvmya
keippyggdtlftsmytawetlsptmqatieglnvvhsatrvfgslyqaqnrrfsntsvk
vmdvdagdretvhplvvthpetgrkglyvnqvycqriegmsekesepllsflfahatkpe
ftcrvrwqegdvlvwdnlctqhyavpdyagkfryltrttvggvrpar

Sequence, based on observed residues (ATOM records):

>d6d1oh_ b.82.2.0 (H:) automated matches {Sphingobium herbicidovorans [TaxId: 1219045]}
sqrferiavqpltgvlgaeitgvdlreplddstwneildafhtyqviyfpgqaitneqhi
afsrrfgpvdpvpllksiegypevqmirreanesgrvigenwhtdstfldappaavvmya
keippyggdtlftsmytawetlsptmqatieglnvvhsatrvfgslyqaqndvdagdret
vhplvvthpetgrkglyvnqvycqriegmsekesepllsflfahatkpeftcrvrwqegd
vlvwdnlctqhyavpdyagkfryltrttvggvrpar

Timeline for d6d1oh_:

• d6d1oh_ first appeared in SCOPe 2.07