SCOPe 2.01: Domain d2mind_: 2min D:

Lineage for d2mind_ (2min D:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.92: Chelatase-like [53799] (3 superfamilies)
   duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134

4. Superfamily c.92.2: "Helical backbone" metal receptor [53807] (5 families)
   contains a long alpha helical insertion in the interdomain linker

5. Family c.92.2.3: Nitrogenase iron-molybdenum protein [53816] (3 proteins)
   contains three domains of this fold; "Helical backbone" holds domains 2 and 3
   both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3

6. Protein Nitrogenase iron-molybdenum protein, beta chain [81401] (3 species)
   both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3

7. Species Azotobacter vinelandii [TaxId:354] [81397] (15 PDB entries)

8. Domain d2mind_: 2min D: [35612]
   Other proteins in same PDB: d2mina_, d2minc_
   complexed with ca, cfm, clf, hca

Details for d2mind_

PDB Entry: 2min, 2.03 Å

PDB Description: nitrogenase mofe protein from azotobacter vinelandii, oxidized state

PDB Compounds: (D:) nitrogenase molybdenum iron protein

SCOPe Domain Sequences for d2mind_:

Sequence; same for both SEQRES and ATOM records:

>d2mind_ c.92.2.3 (D:) Nitrogenase iron-molybdenum protein, beta chain {Azotobacter vinelandii [TaxId: 354]}
sqqvdkikasyplfldqdykdmlakkrdgfeekypqdkidevfqwtttkeyqelnfqrea
ltvnpakacqplgavlcalgfektmpyvhgsqgcvayfrsyfnrhfrepvscvsdsmted
aavfggqqnmkdglqnckatykpdmiavsttcmaevigddlnafinnskkegfipdefpv
pfahtpsfvgshvtgwdnmfegiaryftlksmddkvvgsnkkinivpgfetylgnfrvik
rmlsemgvgysllsdpeevldtpadgqfrmyaggttqeemkdapnalntvllqpwhlekt
kkfvegtwkhevpklnipmgldwtdeflmkvseisgqpipasltkergrlvdmmtdshtw
lhgkrfalwgdpdfvmglvkfllelgcepvhilchngnkrwkkavdailaaspygknatv
yigkdlwhlrslvftdkpdfmignsygkfiqrdtlhkgkefevplirigfpifdrhhlhr
sttlgyegamqilttlvnsilerldeetrgmqatdynhdlvr

Timeline for d2mind_:

• d2mind_ first appeared (with stable ids) in SCOP 1.55
  
• d2mind_ appears in SCOP 1.75
  
• d2mind_ appears in SCOPe 2.02
  
• d2mind_ appears in the current release, SCOPe 2.08