SCOPe 2.07: Domain d5ns8a1: 5ns8 A:2-439

Lineage for d5ns8a1 (5ns8 A:2-439)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (125 species)
   not a true protein

7. Species Marine metagenome [TaxId:408172] [355785] (2 PDB entries)

8. Domain d5ns8a1: 5ns8 A:2-439 [355817]
   Other proteins in same PDB: d5ns8a2, d5ns8b2, d5ns8c2
   automated match to d1uz1b_
   complexed with gol, noj, so4; mutant

Details for d5ns8a1

PDB Entry: 5ns8, 1.55 Å

PDB Description: crystal structure of beta-glucosidase bglm-g1 mutant h75r from marine metagenome in complex with inhibitor 1-deoxynojirimycin

PDB Compounds: (A:) beta-glucosidase M - G1

SCOPe Domain Sequences for d5ns8a1:

Sequence; same for both SEQRES and ATOM records:

>d5ns8a1 c.1.8.0 (A:2-439) automated matches {Marine metagenome [TaxId: 408172]}
kkwgdmftwgvstssyqiegaanqggrgpsiwdtfskipgavangdngdvacdhyhryne
dldlmkwlgvgayrfsiawprvipsgygalnkegmdfydrlidgalergitpwptlyhwd
lpqslqdkggwnnrdcaywfaeysqkmaeafsdrlknwitinepfcsawlghlygvmapg
ikdlktginashhlllghglatkairevsselkvgitlnftpaitlgessedklavelad
gfdnrwfgdpvfkakypedivkafgkevpihpgdmeiistpldylglnyyfrqtveydat
akplpykqvtapnvertgmgwevhaqsftellervskeykpkeifitengsawddevvdg
kvddpnrvsylerhldamfaaknkgvpisgyfawslidnfewaygyakrfgiiyvdyqtq
kripkssayyyqkrikes

Timeline for d5ns8a1:

• d5ns8a1 is new in SCOPe 2.07-stable
  
• d5ns8a1 appears in the current release, SCOPe 2.08