Lineage for d6c0ja1 (6c0j A:-1-429)

  1. Root: SCOPe 2.08
  2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. Family e.8.1.2: Reverse transcriptase [56686] (3 proteins)
  6. Protein HIV-1 reverse transcriptase [56689] (4 species)
  7. Species Human immunodeficiency virus type 1 [TaxId:11676] [56690] (203 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. Domain d6c0ja1: 6c0j A:-1-429 [355478]
    Other proteins in same PDB: d6c0ja2
    automated match to d2be2a1
    complexed with edo, k5a, mg, so4

Details for d6c0ja1

PDB Entry: 6c0j (more details), 1.92 Å

PDB Description: crystal structure of hiv-1 reverse transcriptase in complex with non- nucleoside inhibitor k-5a2
PDB Compounds: (A:) Reverse transcriptase/ribonuclease H

SCOPe Domain Sequences for d6c0ja1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6c0ja1 e.8.1.2 (A:-1-429) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]}
mvpispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpynt
pvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsv
pldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfaaqnpdi
viyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdk
wtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtkaltevipltee
aelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmr
gahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvn
tpplvklwyql

SCOPe Domain Coordinates for d6c0ja1 are not available.

Timeline for d6c0ja1:

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Domains from same chain:
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d6c0ja2
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Domains from other chains:
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d6c0jb_