SCOPe 2.01: Domain d1ygpa_: 1ygp A:

Lineage for d1ygpa_ (1ygp A:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (12 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53770] (1 PDB entry)

8. Domain d1ygpa_: 1ygp A: [35540]
   complexed with plp, po4

Details for d1ygpa_

PDB Entry: 1ygp, 2.8 Å

PDB Description: phosphorylated form of yeast glycogen phosphorylase with phosphate bound in the active site.

PDB Compounds: (A:) yeast glycogen phosphorylase

SCOPe Domain Sequences for d1ygpa_:

Sequence, based on SEQRES records:

>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
trrltgflpqeiksidtmipllsralwnkhqvkkfnkaedfqdrfidhvettlarslync
ddmvayeaasmsirdnlvidwnktqqkfttrdpkrvyylsleflmgraldnalinmkied
pedpaaskgkpremikgaldelgfkledvldqepdaglgngglgrlaacfvdsmategip
awgyglryeygifaqkiidgyqvetpdywlnsgnpweiernevqipvtfygyvdrpeggk
ttlsasqwiggervlavaydfpvpgfktsnvnnlrlwqarpttefdlnkfnngdyknsva
qqqraesitavlypndnfaqgkelrlkqqyfwcaaslhdilrrfkkskrpwtefpdqvai
qlndthptlaivelqrvlvdlekldwheawdivtktfaytnhtvmqealekwprrlfghl
lprhleiiydinwffledvakkfpkdvdllsrisiieensperqirmaflaivgshkvng
vvelhselikttifkdfikfygpskfvnvtngitprrwlkqanpslaklisetlndptee
ylldmakltqlekyvedkeflkkwnqvklnnkirlvdlikkendgvdiinreylddtlfd
mqvkriheykrqqlnvfgiiyrylamknmlkngasieevarkyprkvsifggksapgyym
akliiklincvadivnndesiehllkvvfvadynvskaeiiipasdlsehistagteasg
tsnmkfvmnggliigtvdganveitreigednvflfgnlsenveelrynhqyhpqdlpss
ldsvlsyiesgqfspenpnefkplvdsikyhgdyylvsddfesylathelvdqefhnqrs
ewlkksvlslanvgffssdrcieeysdtiwnvepvt

Sequence, based on observed residues (ATOM records):

>d1ygpa_ c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
trrltgflpqeiksidtmipllsralwnkhqvkkfnkaedfqdrfidhvettlarslync
ddmvayeaasmsirdnlvidwnktqqkfttrdpkrvyylsleflmgraldnalinmkipr
emikgaldelgfkledvldqepdaglgngglgrlaacfvdsmategipawgyglryeygi
faqkiidgyqvetpdywlnsgnpweiernevqipvtfygyvdrpttlsasqwiggervla
vaydfpvpgfktsnvnnlrlwqarpttefdlnkfnngdyknsvaqqqraesitavlypnd
nfaqgkelrlkqqyfwcaaslhdilrrfkkskrpwtefpdqvaiqlndthptlaivelqr
vlvdlekldwheawdivtktfaytnhtvmqealekwprrlfghllprhleiiydinwffl
edvakkfpkdvdllsrisiieensperqirmaflaivgshkvngvvelhselikttifkd
fikfygpskfvnvtngitprrwlkqanpslaklisetlndpteeylldmakltqlekyve
dkeflkkwnqvklnnkirlvdlikkendgvdiinreylddtlfdmqvkriheykrqqlnv
fgiiyrylamknmlkngasieevarkyprkvsifggksapgyymakliiklincvadivn
ndesiehllkvvfvadynvskaeiiipasdlsehistagteasgtsnmkfvmnggliigt
vdganveitreigednvflfgnlsenveelrynhqyhpqdlpssldsvlsyieqfspenp
nefkplvdsikyhgdyylvsddfesylathelvdqefhnqrsewlkksvlslanvgffss
drcieeysdtiwnvepvt

Timeline for d1ygpa_:

• d1ygpa_ first appeared (with stable ids) in SCOP 1.55
  
• d1ygpa_ appears in SCOP 1.75
  
• d1ygpa_ appears in SCOPe 2.02
  
• d1ygpa_ appears in the current release, SCOPe 2.08