Lineage for d5xrta_ (5xrt A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2370814Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2370815Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2370862Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)
  6. 2370863Protein Hemagglutinin [49824] (16 species)
    includes rudiment esterase domain
  7. 3055193Species Influenza a virus (a/swine/minnesota/a01134337/2010(h3n2)) [TaxId:1159784] [355255] (2 PDB entries)
  8. 3055232Domain d5xrta_: 5xrt A: [355294]
    Other proteins in same PDB: d5xrtb_, d5xrtd_, d5xrtf_, d5xrth_
    automated match to d1hgja_
    complexed with bma, cac, fuc, ful, man, nag

Details for d5xrta_

PDB Entry: 5xrt (more details), 3.15 Å

PDB Description: crystal structure of a/minnesota/11/2010 (h3n2) influenza virus hemagglutinin
PDB Compounds: (A:) Hemagglutinin

SCOPe Domain Sequences for d5xrta_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xrta_ b.19.1.2 (A:) Hemagglutinin {Influenza a virus (a/swine/minnesota/a01134337/2010(h3n2)) [TaxId: 1159784]}
nsmatlclghhavpngtlvktitddqievtnatelvqssstgricnsphqildgknctli
dallgdphcddfqnkewdlfverstaysncypyyvpdyatlrslvassgnleftqesfnw
tgvaqdgssyacrrgsvnsffsrlnwlynlnykypeqnvtmpnndkfdklyiwgvhhpgt
dkdqtnlyvqasgrvivstkrsqqtvipnigsrpwvrgvssiisiywtivkpgdillins
tgnliaprgyfkiqsgkssimrsdahidecnsecitpngsipndkpfqnvnkitygacpr
yvkqntlklatgmrnvpek

SCOPe Domain Coordinates for d5xrta_:

Click to download the PDB-style file with coordinates for d5xrta_.
(The format of our PDB-style files is described here.)

Timeline for d5xrta_:

  • d5xrta_ appears in periodic updates to SCOPe 2.07 starting on 2018-07-26