Lineage for d5zwea_ (5zwe A:)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. Protein Vitamin D nuclear receptor [48528] (2 species)
  7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [101432] (25 PDB entries)
  8. Domain d5zwea_: 5zwe A: [355076]
    automated match to d1ie9a_
    complexed with 9k0

Details for d5zwea_

PDB Entry: 5zwe (more details), 2.72 Å

PDB Description: covalent bond formation between histidine of vitamin d receptor (vdr) and a full agonist having a vinyl ketone group via conjugate addition reaction
PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d5zwea_:

Sequence, based on SEQRES records: (download)

>d5zwea_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphladl
vsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdy
kydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklve
aiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmk
ltplvlevfgn

Sequence, based on observed residues (ATOM records): (download)

>d5zwea_ a.123.1.1 (A:) Vitamin D nuclear receptor {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmsplsmlphladlvsysiqkvigf
akmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskag
htlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlq
tyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgn

SCOPe Domain Coordinates for d5zwea_ are not available.

Timeline for d5zwea_: