Lineage for d5wm0a2 (5wm0 A:199-355)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2430785Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2430786Superfamily b.121.1: PHM/PNGase F [49742] (2 families) (S)
    members of this superfamily bind peptide substrates
    duplication: consists of two domains of this fold packed together like the adjacent nucleoplasmin subunits
  5. 2430800Family b.121.1.2: Peptidylglycine alpha-hydroxylating monooxygenase, PHM [49746] (1 protein)
  6. 2430801Protein Peptidylglycine alpha-hydroxylating monooxygenase, PHM [63402] (1 species)
  7. 2430802Species Norway rat (Rattus norvegicus) [TaxId:10116] [49748] (26 PDB entries)
  8. 2430846Domain d5wm0a2: 5wm0 A:199-355 [355066]
    automated match to d1phma2

Details for d5wm0a2

PDB Entry: 5wm0 (more details), 2.4 Å

PDB Description: crystal structure of apo wild type peptidylglycine alpha-hydroxylating monooxygenase (phm) soaked with peptide (peptide not observed)
PDB Compounds: (A:) Peptidyl-glycine alpha-amidating monooxygenase

SCOPe Domain Sequences for d5wm0a2:

Sequence, based on SEQRES records: (download)

>d5wm0a2 b.121.1.2 (A:199-355) Peptidylglycine alpha-hydroxylating monooxygenase, PHM {Norway rat (Rattus norvegicus) [TaxId: 10116]}
pliagmylmmsvdtvippgekvvnadiscqykmypmhvfayrvhthhlgkvvsgyrvrng
qwtligrqnpqlpqafypvehpvdvtfgdilaarcvftgegrteathiggtssdemcnly
imyymeakyalsfmtctknvapdmfrtipaeanipip

Sequence, based on observed residues (ATOM records): (download)

>d5wm0a2 b.121.1.2 (A:199-355) Peptidylglycine alpha-hydroxylating monooxygenase, PHM {Norway rat (Rattus norvegicus) [TaxId: 10116]}
pliagmylmmsvdtvippgekvvnadiscqykmypmhvfayrvhthhlgkvvsgyrvrng
qwtligrqnpqlpqafypvehpvdvtfgdilaarcvftgegrteathigtssdemcnlyi
myymeakyalsfmtctknvapdmfrtipaeanipip

SCOPe Domain Coordinates for d5wm0a2:

Click to download the PDB-style file with coordinates for d5wm0a2.
(The format of our PDB-style files is described here.)

Timeline for d5wm0a2:

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d5wm0a1