Lineage for d5y0db_ (5y0d B:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2311419Fold a.22: Histone-fold [47112] (1 superfamily)
    core: 3 helices; long middle helix is flanked at each end with shorter ones
  4. 2311420Superfamily a.22.1: Histone-fold [47113] (5 families) (S)
  5. 2311421Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
    form octamers composed of two copies of each of the four histones
  6. 2311791Protein Histone H4 [47125] (7 species)
  7. 2311792Species African clawed frog (Xenopus laevis) [TaxId:8355] [47127] (67 PDB entries)
  8. 2311813Domain d5y0db_: 5y0d B: [355047]
    Other proteins in same PDB: d5y0dc_, d5y0dd_, d5y0dg_, d5y0dh_
    automated match to d1kx5b_
    protein/DNA complex; complexed with cl, mn; mutant

Details for d5y0db_

PDB Entry: 5y0d (more details), 1.99 Å

PDB Description: crystal structure of the human nucleosome containing the h2b e76k mutant
PDB Compounds: (B:) histone h4

SCOPe Domain Sequences for d5y0db_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5y0db_ a.22.1.1 (B:) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
niqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvtam
dvvyalkrqgrtlygfg

SCOPe Domain Coordinates for d5y0db_:

Click to download the PDB-style file with coordinates for d5y0db_.
(The format of our PDB-style files is described here.)

Timeline for d5y0db_: