Lineage for d5vx5a1 (5vx5 A:64-223)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2373039Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2373040Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2375103Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2375104Protein automated matches [190437] (63 species)
    not a true protein
  7. 2375619Species Rotavirus a [TaxId:28875] [277665] (10 PDB entries)
  8. 3054930Domain d5vx5a1: 5vx5 A:64-223 [354992]
    Other proteins in same PDB: d5vx5a2
    automated match to d2aena_
    complexed with bgc, fuc, gal, nag

Details for d5vx5a1

PDB Entry: 5vx5 (more details), 1.29 Å

PDB Description: vp8* of a g2p[4] human rotavirus in complex with lnfp1
PDB Compounds: (A:) Outer capsid protein VP4

SCOPe Domain Sequences for d5vx5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vx5a1 b.29.1.0 (A:64-223) automated matches {Rotavirus a [TaxId: 28875]}

SCOPe Domain Coordinates for d5vx5a1:

Click to download the PDB-style file with coordinates for d5vx5a1.
(The format of our PDB-style files is described here.)

Timeline for d5vx5a1:

  • d5vx5a1 is new in SCOPe 2.07-stable

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