SCOPe 2.08: Domain d3amva_: 3amv A:

Lineage for d3amva_ (3amv A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
   automatically mapped to Pfam PF00343

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (76 PDB entries)
   Uniprot P00489 ! Uniprot P00489

8. Domain d3amva_: 3amv A: [35495]
   complexed with bin, glc, gol, plp

Details for d3amva_

PDB Entry: 3amv, 2.1 Å

PDB Description: allosteric inhibition of glycogen phosphorylase a by a potential antidiabetic drug

PDB Compounds: (A:) protein (glycogen phosphorylase)

SCOPe Domain Sequences for d3amva_:

Sequence, based on SEQRES records:

>d3amva_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
sdqekrkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlv
grwirtqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeelee
ieedaglgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlr
ygnpwekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlw
sakapndfnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatl
qdiirrfksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdka
wevtvktcaytnhtvlpealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdr
lrrmslveegavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktn
gitprrwlvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklk
faaylereykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvm
iggkaapgyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlse
qistagteasgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqr
gynaqeyydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcq
ervsalyknprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlp

Sequence, based on observed residues (ATOM records):

>d3amva_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
sdqekrkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlv
grwirtqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeelee
ieedaglgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlr
ygnpwekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlw
sakapnggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfks
snfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcaytnhtvlpea
lerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveegavkrinmah
lciagshavngvarihseilkktifkdfyelephkfqnktngitprrwlvlcnpglaeii
aerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylereykvhinpnslf
dvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkaapgyhmakmiikli
taigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagteasgtgnmkfml
ngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydripelrqiie
qlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknprewtrmvir
niatsgkfssdrtiaqyareiwgvepsrqrlp

Timeline for d3amva_:

• d3amva_ first appeared (with stable ids) in SCOP 1.55
  
• d3amva_ appears in SCOPe 2.07