SCOPe 2.08: Domain d1noic_: 1noi C:

Lineage for d1noic_ (1noi C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
   automatically mapped to Pfam PF00343

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (76 PDB entries)
   Uniprot P00489 ! Uniprot P00489

8. Domain d1noic_: 1noi C: [35486]
   complexed with ntz, plp, po4

Details for d1noic_

PDB Entry: 1noi, 2.5 Å

PDB Description: complex of glycogen phosphorylase with a transition state analogue nojirimycin tetrazole and phosphate in the t and r states

PDB Compounds: (C:) glycogen phosphorylase

SCOPe Domain Sequences for d1noic_:

Sequence, based on SEQRES records:

>d1noic_ c.87.1.4 (C:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
rkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwir
tqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieeda
glgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpw
ekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakap
ndfnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiir
rfksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtv
ktcaytnhtvipealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrms
lveegavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitpr
rwlvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaayl
ereykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkp
apgyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqista
gteasgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaq
eyydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsa
lyknprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapd

Sequence, based on observed residues (ATOM records):

>d1noic_ c.87.1.4 (C:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
rkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwir
tqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieeda
glgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpw
ekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakap
ndfnlkdfnvggyiqavldrnlaenisrvlypegkelrlkqeyfvvaatlqdiirrfkss
kfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcay
tnhtvipealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveeg
avkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitprrwlvl
cnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylereyk
vhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkpapgyh
makmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagteas
gtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydr
ipelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknp
rewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapd

Timeline for d1noic_:

• d1noic_ first appeared (with stable ids) in SCOP 1.55
  
• d1noic_ appears in SCOPe 2.07