Lineage for d5gpba_ (5gpb A:)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1007198Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
    consists of two non-similar domains with 3 layers (a/b/a) each
    domain 1: parallel beta-sheet of 7 strands, order 3214567
    domain 2: parallel beta-sheet of 6 strands, order 321456
  4. 1007199Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (12 families) (S)
  5. 1007251Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
  6. 1007252Protein Glycogen phosphorylase [53767] (3 species)
    both domains are elaborated with many insertions
  7. 1007287Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (58 PDB entries)
    Uniprot P00489 ! Uniprot P00489
  8. 1007313Domain d5gpba_: 5gpb A: [35483]
    complexed with gpm, plp

Details for d5gpba_

PDB Entry: 5gpb (more details), 2.3 Å

PDB Description: comparison of the binding of glucose and glucose-1-phosphate derivatives to t-state glycogen phosphorylase b
PDB Compounds: (A:) glycogen phosphorylase b

SCOPe Domain Sequences for d5gpba_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5gpba_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
rkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwir
tqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieeda
glgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpw
ekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakap
ndfnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiir
rfksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtv
ktcaytnhtvipealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrms
lveegavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitpr
rwlvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaayl
ereykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggka
apgyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqista
gteasgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaq
eyydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsa
lyknprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapdekip

SCOPe Domain Coordinates for d5gpba_:

Click to download the PDB-style file with coordinates for d5gpba_.
(The format of our PDB-style files is described here.)

Timeline for d5gpba_: