Lineage for d1noja_ (1noj A:)

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1007198Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
    consists of two non-similar domains with 3 layers (a/b/a) each
    domain 1: parallel beta-sheet of 7 strands, order 3214567
    domain 2: parallel beta-sheet of 6 strands, order 321456
  4. 1007199Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (12 families) (S)
  5. 1007251Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
  6. 1007252Protein Glycogen phosphorylase [53767] (3 species)
    both domains are elaborated with many insertions
  7. 1007287Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (58 PDB entries)
    Uniprot P00489 ! Uniprot P00489
  8. 1007306Domain d1noja_: 1noj A: [35479]
    complexed with ntz, plp, po4

Details for d1noja_

PDB Entry: 1noj (more details), 2.4 Å

PDB Description: complex of glycogen phosphorylase with a transition state analogue nojirimycin tetrazole and phosphate in the t state
PDB Compounds: (A:) glycogen phosphorylase

SCOPe Domain Sequences for d1noja_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1noja_ c.87.1.4 (A:) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
qisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtq
qhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedagl
gngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpwek
arpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapnd
fnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrf
ksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvkt
caytnhtvipealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslv
eegavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitprrw
lvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaayler
eykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkpap
gyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagt
easgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqey
ydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsaly
knprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapdekip

SCOPe Domain Coordinates for d1noja_:

Click to download the PDB-style file with coordinates for d1noja_.
(The format of our PDB-style files is described here.)

Timeline for d1noja_: