Lineage for d13pkd_ (13pk D:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2141948Fold c.86: Phosphoglycerate kinase [53747] (1 superfamily)
    consists of two non-similar domains, 3 layers (a/b/a) each
    Domain 1 has parallel beta-sheet of 6 strands, order 342156
    Domain 2 has parallel beta-sheet of 6 strands, order 321456
  4. 2141949Superfamily c.86.1: Phosphoglycerate kinase [53748] (2 families) (S)
  5. 2141950Family c.86.1.1: Phosphoglycerate kinase [53749] (2 protein domains)
    Domain 2 binds ATP
    automatically mapped to Pfam PF00162
  6. 2141951Protein Phosphoglycerate kinase [53750] (8 species)
  7. 2141979Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [53754] (2 PDB entries)
  8. 2141984Domain d13pkd_: 13pk D: [35458]
    complexed with 3pg, adp, mg, po4

Details for d13pkd_

PDB Entry: 13pk (more details), 2.5 Å

PDB Description: ternary complex of phosphoglycerate kinase from trypanosoma brucei
PDB Compounds: (D:) 3-phosphoglycerate kinase

SCOPe Domain Sequences for d13pkd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d13pkd_ c.86.1.1 (D:) Phosphoglycerate kinase {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
ekksinecdlkgkkvlirvdfnvpvkngkitndyrirsalptlkkvlteggscvlmshlg
rpkgipmaqagkirstggvpgfqqkatlkpvakrlselllrpvtfapdclnaadvvskms
pgdvvllenvrfykeegskkakdreamakilasygdvyisdafgtahrdsatmtgipkil
gngaagylmekeisyfakvlgnpprplvaivggakvsdkiqlldnmlqridylliggama
ytflkaqgysigkskceesklefarsllkkaedrkvqvilpidhvchtefkavdsplite
dqnipeghmaldigpktiekyvqtigkcksaiwngpmgvfemvpyskgtfaiakamgrgt
hehglmsiigggdsasaaelsgeakrmshvstgggaslellegktlpgvtvlddk

SCOPe Domain Coordinates for d13pkd_:

Click to download the PDB-style file with coordinates for d13pkd_.
(The format of our PDB-style files is described here.)

Timeline for d13pkd_: