Lineage for d6fs6c1 (6fs6 C:1-198)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2490159Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. 2490160Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families) (S)
  5. 2490599Family c.52.1.34: PA N-terminal domain [254166] (2 proteins)
    Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458
  6. 2490600Protein PA N-terminal domain [254375] (7 species)
  7. 2490626Species Influenza A virus [TaxId:93838] [254808] (91 PDB entries)
  8. 2490699Domain d6fs6c1: 6fs6 C:1-198 [354575]
    Other proteins in same PDB: d6fs6a2, d6fs6b2, d6fs6c2, d6fs6d2, d6fs6e2, d6fs6f2
    automated match to d4e5ec_
    complexed with e4z, mn

Details for d6fs6c1

PDB Entry: 6fs6 (more details), 2.29 Å

PDB Description: influenza a/california/04/2009 (ph1n1) endonuclease with bound inhibitor, baloxavir acid (bxa)
PDB Compounds: (C:) Polymerase acidic protein,Polymerase acidic protein

SCOPe Domain Sequences for d6fs6c1:

Sequence, based on SEQRES records: (download)

>d6fs6c1 c.52.1.34 (C:1-198) PA N-terminal domain {Influenza A virus [TaxId: 93838]}

Sequence, based on observed residues (ATOM records): (download)

>d6fs6c1 c.52.1.34 (C:1-198) PA N-terminal domain {Influenza A virus [TaxId: 93838]}

SCOPe Domain Coordinates for d6fs6c1:

Click to download the PDB-style file with coordinates for d6fs6c1.
(The format of our PDB-style files is described here.)

Timeline for d6fs6c1: