Lineage for d5od8b1 (5od8 B:1-106)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2754035Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 2754036Protein automated matches [190740] (30 species)
    not a true protein
  7. 2754280Species Human (Homo sapiens) [TaxId:9606] [187920] (1747 PDB entries)
  8. 2756814Domain d5od8b1: 5od8 B:1-106 [354374]
    Other proteins in same PDB: d5od8b2
    automated match to d1dn0a1

Details for d5od8b1

PDB Entry: 5od8 (more details), 2.2 Å

PDB Description: crystal structure of the ra-associated mab b2 (fab fragment)
PDB Compounds: (B:) B2 Fab fragment - Light chain

SCOPe Domain Sequences for d5od8b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5od8b1 b.1.1.0 (B:1-106) automated matches {Human (Homo sapiens) [TaxId: 9606]}
airmtqspssvsasvgdrvtitcrasqsisswlawyqqkpgkapklliysasslqsgvps
rfsgsgsgtdftltisslqpedfatyycqqansfpftfgpgtkvdi

SCOPe Domain Coordinates for d5od8b1:

Click to download the PDB-style file with coordinates for d5od8b1.
(The format of our PDB-style files is described here.)

Timeline for d5od8b1:

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Domains from same chain:
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d5od8b2
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Domains from other chains:
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d5od8a_