Lineage for d5oxra2 (5oxr A:235-355)

  1. Root: SCOPe 2.08
  2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. Family d.169.1.1: C-type lectin domain [56437] (29 proteins)
    Pfam PF00059
  6. Protein Surfactant protein, lectin domain [56461] (3 species)
  7. Species Human (Homo sapiens), SP-D [TaxId:9606] [56462] (11 PDB entries)
  8. Domain d5oxra2: 5oxr A:235-355 [353722]
    Other proteins in same PDB: d5oxra1, d5oxrb1, d5oxrc1
    automated match to d1pwba1
    complexed with ca

Details for d5oxra2

PDB Entry: 5oxr (more details), 1.7500000000000002 Å

PDB Description: crystal structure of human lung surfactant protein d trimeric fragment with bound ligand salmonella enterica minnesota r7 oligosaccharide
PDB Compounds: (A:) Pulmonary surfactant-associated protein D

SCOPe Domain Sequences for d5oxra2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5oxra2 d.169.1.1 (A:235-355) Surfactant protein, lectin domain {Human (Homo sapiens), SP-D [TaxId: 9606]}
pngqsvgekifktagfvkpfteaqllctqaggqlasprsaaenaalqqlvvakneaafls
mtdsktegkftyptgeslvysnwapgepnddggsedcveiftngkwndracgekrlvvce
f

SCOPe Domain Coordinates for d5oxra2 are not available.

Timeline for d5oxra2:

View in 3D
Domains from same chain:
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d5oxra1
View in 3D
Domains from other chains:
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d5oxrb1, d5oxrb2, d5oxrc1, d5oxrc2