Class d: Alpha and beta proteins (a+b) [53931] (388 folds) |
Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily) mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix |
Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) duplication: consists of two similar domain swapped with C-terminal strands |
Family d.21.1.1: Diaminopimelate epimerase [54507] (2 proteins) automatically mapped to Pfam PF01678 |
Protein automated matches [352381] (2 species) not a true protein |
Species Escherichia coli [TaxId:83333] [353391] (4 PDB entries) |
Domain d5ygua1: 5ygu A:1-130 [353392] automated match to d4ijza1 protein/RNA complex; complexed with iod, tla |
Domain d5ygua2: 5ygu A:131-274 [353393] automated match to d4ijza2 protein/RNA complex; complexed with iod, tla |
Domain d6vcka1: 6vck A:1-130 [380279] Other proteins in same PDB: d6vcka3 automated match to d4ijza1 protein/RNA complex; complexed with cl, f, gdp, mg |
Domain d6vcka2: 6vck A:131-274 [380280] Other proteins in same PDB: d6vcka3 automated match to d4ijza2 protein/RNA complex; complexed with cl, f, gdp, mg |
Domain d6vcla1: 6vcl A:1-130 [380246] Other proteins in same PDB: d6vcla3 automated match to d4ijza1 protein/RNA complex; complexed with 0o2, cl, f, gol, mg |
Domain d6vcla2: 6vcl A:131-274 [380247] Other proteins in same PDB: d6vcla3 automated match to d4ijza2 protein/RNA complex; complexed with 0o2, cl, f, gol, mg |
Domain d6vcma1: 6vcm A:1-130 [380250] Other proteins in same PDB: d6vcma3 automated match to d4ijza1 protein/RNA complex; complexed with cl, f, gtp, mg |
Domain d6vcma2: 6vcm A:131-274 [380251] Other proteins in same PDB: d6vcma3 automated match to d4ijza2 protein/RNA complex; complexed with cl, f, gtp, mg |
Timeline for Species Escherichia coli [TaxId:83333] from d.21.1.1 automated matches: