Lineage for d5xlhs_ (5xlh S:)

  1. Root: SCOPe 2.08
  2. 3012399Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)
  3. 3019032Fold e.19: HydA/Nqo6-like [56769] (1 superfamily)
    2 domains: (1) alpa/beta; (2) Fe-S cluster-bound
  4. 3019033Superfamily e.19.1: HydA/Nqo6-like [56770] (3 families) (S)
  5. 3019034Family e.19.1.1: Nickel-iron hydrogenase, small subunit [56771] (2 proteins)
  6. 3019035Protein Nickel-iron hydrogenase, small subunit [56772] (5 species)
  7. 3019052Species Desulfovibrio vulgaris [TaxId:881] [56774] (16 PDB entries)
  8. 3019068Domain d5xlhs_: 5xlh S: [353288]
    Other proteins in same PDB: d5xlhl_
    automated match to d1ubks_
    complexed with f3s, mg, mpd, nfv, sf4

Details for d5xlhs_

PDB Entry: 5xlh (more details), 1.93 Å

PDB Description: crystal structure of aerobically purified and aerobically crystallized for 12weeks d. vulgaris miyazaki f [nife]-hydrogenase
PDB Compounds: (S:) Periplasmic [NiFe] hydrogenase Small subunit

SCOPe Domain Sequences for d5xlhs_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5xlhs_ e.19.1.1 (S:) Nickel-iron hydrogenase, small subunit {Desulfovibrio vulgaris [TaxId: 881]}
prrpsvvylhnaectgcsesvlrafepyidtlildtlsldyhetimaaagdaaeaaleqa
vnsphgfiavveggiptaangiygkvanhtmldicsrilpkaqaviaygtcatfggvqaa
kpnptgakgvndalkhlgvkainiagcppnpynlvgtivyylknkaapeldslnrptmff
gqtvheqcprlphfdagefapsfeseearkgwclyelgckgpvtmnncpkikfnqtnwpv
daghpcigcsepdfwdamtpfyqn

SCOPe Domain Coordinates for d5xlhs_:

Click to download the PDB-style file with coordinates for d5xlhs_.
(The format of our PDB-style files is described here.)

Timeline for d5xlhs_: