Lineage for d1fdia2 (1fdi A:1-564)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2140533Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
    contains of two similar intertwined domains related by pseudo dyad; duplication
    core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451
  4. 2140534Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1 family) (S)
    molybdopterine enzyme
  5. 2140535Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 protein domains)
    domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
  6. 2140562Protein Formate dehydrogenase H [53711] (1 species)
  7. 2140563Species Escherichia coli [TaxId:562] [53712] (4 PDB entries)
  8. 2140567Domain d1fdia2: 1fdi A:1-564 [35326]
    Other proteins in same PDB: d1fdia1
    complexed with 6mo, mgd, no2, sf4

Details for d1fdia2

PDB Entry: 1fdi (more details), 2.9 Å

PDB Description: oxidized form of formate dehydrogenase h from e. coli complexed with the inhibitor nitrite
PDB Compounds: (A:) formate dehydrogenase h

SCOPe Domain Sequences for d1fdia2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1fdia2 c.81.1.1 (A:1-564) Formate dehydrogenase H {Escherichia coli [TaxId: 562]}
mkkvvtvcpycasgckinlvvdngkivraeaaqgktnqgtlclkgyygwdfindtqiltp
rlktpmirrqrggklepvswdealnyvaerlsaikekygpdaiqttgssrgtgnetnyvm
qkfaravigtnnvdccarvahgpsvaglhqsvgngamsnaineidntdlvfvfgynpads
hpivanhvinakrngakiivcdprkietariadmhialkngsniallnamghviieenly
dkafvasrtegfeeyrkivegytpesveditgvsaseirqaarmyaqaksaailwgmgvt
qfyqgvetvrsltslamltgnlgkphagvnpvrgqnnvqgacdmgalpdtypgyqyvkdp
anrekfakawgveslpahtgyriselphraahgevraayimgedplqtdaelsavrkafe
dlelvivqdifmtktasaadvilpstswgehegvftaadrgfqrffkavepkwdlktdwq
iiseiatrmgypmhynntqeiwdelrhlcpdfygatyekmgelgfiqwpcrdtsdadqgt
sylfkekfdtpnglaqfftcdwva

SCOPe Domain Coordinates for d1fdia2:

Click to download the PDB-style file with coordinates for d1fdia2.
(The format of our PDB-style files is described here.)

Timeline for d1fdia2:

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Domains from same chain:
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d1fdia1