SCOPe 2.08: Domain d1e5va2: 1e5v A:3-625

Lineage for d1e5va2 (1e5v A:3-625)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
   contains of two similar intertwined domains related by pseudo dyad; duplication
   core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

4. Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (2 families)
   molybdopterine enzyme

5. Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
   domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase

6. Protein Dimethylsulfoxide reductase (DMSO reductase) [53708] (2 species)

7. Species Rhodobacter capsulatus [TaxId:1061] [53710] (10 PDB entries)

8. Domain d1e5va2: 1e5v A:3-625 [35320]
   Other proteins in same PDB: d1e5va1, d1e5vc1
   complexed with 2mo, pgd, so4

Details for d1e5va2

PDB Entry: 1e5v, 2.4 Å

PDB Description: oxidized dmso reductase exposed to hepes buffer

PDB Compounds: (A:) Dimethyl sulfoxide/trimethylamine N-oxide reductase

SCOPe Domain Sequences for d1e5va2:

Sequence, based on SEQRES records:

>d1e5va2 c.81.1.1 (A:3-625) Dimethylsulfoxide reductase (DMSO reductase) {Rhodobacter capsulatus [TaxId: 1061]}
langtvmsgshwgvftatvengrataftpwekdphpspmlagvldsiysptrikypmvrr
eflekgvnadrstrgngdfvrvswdqaldlvaaevkrveetygpegvfggsygwkspgrl
hncttllrrmltlaggyvngagdystgaaqvimphvvgtlevyeqqtawpvlaentevmv
fwaadpiktsqigwvipehgaypglealkakgtkvividpvrtktveffgaehitpkpqt
dvaimlgmahtlvaedlydkdfianytsgfdkflpyldgetdstpktaewaegisgvpae
tikelarlfeskrtmlaagwsmqrmhhgeqahwmlvtlasmlgqiglpgggfglsyhysg
ggtpstsgpalagitdggaatkgpewlaasgasvipvarvvdmlenpgaefdfngtrskf
pdvkmaywvggnpfvhhqdrnrmvkawekletfvvhdfqwtptarhadivlpattsyern
dietigdysntgilamkkiveplyearsdydifaavaerlgkgaeftegkdemgwiksfy
ddaakqgkaagvqmpafdafwaegivefpvtdgadfvryasfredpllnplgtptgliei
yskniekmgyddcpahptwmepl

Sequence, based on observed residues (ATOM records):

>d1e5va2 c.81.1.1 (A:3-625) Dimethylsulfoxide reductase (DMSO reductase) {Rhodobacter capsulatus [TaxId: 1061]}
langtvmsgshwgvftatvengrataftpwekdphpspmlagvldsiysptrikypmvrr
eflekgvnadrstrgngdfvrvswdqaldlvaaevkrveetygpegvfggsygwkspgrl
hncttllrrmltlaggyvngagdystgaaqvimphvvgtlevyeqqtawpvlaentevmv
fwaadpiktsqigwvipehgaypglealkakgtkvividpvrtktveffgaehitpkpqt
dvaimlgmahtlvaedlydkdfianytsgfdkflpyldgetdstpktaewaegisgvpae
tikelarlfeskrtmlaagwsmqrmhhgeqahwmlvtlasmlgqiglpgggfglsyhysg
ggtpstsgpalagitdggasvipvarvvdmlenpgaefdfngtrskfpdvkmaywvggnp
fvhhqdrnrmvkawekletfvvhdfqwtptarhadivlpattsyerndietigdysntgi
lamkkiveplyearsdydifaavaerlgkgaeftegkdemgwiksfyddaakqgkaagvq
mpafdafwaegivefpvtdgadfvryasfredpllnplgtptglieiyskniekmgyddc
pahptwmepl

Timeline for d1e5va2:

• d1e5va2 first appeared (with stable ids) in SCOP 1.55
  
• d1e5va2 appears in SCOPe 2.07