SCOPe 2.07: Domain d5yikf1: 5yik F:1-76

Lineage for d5yikf1 (5yik F:1-76)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (307 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d5yikf1: 5yik F:1-76 [353039]
   Other proteins in same PDB: d5yikf2
   automated match to d4k1rb_

Details for d5yikf1

PDB Entry: 5yik, 3.1 Å

PDB Description: structure of a legionella effector with its substrate

PDB Compounds: (F:) Ubiquitin

SCOPe Domain Sequences for d5yikf1:

Sequence; same for both SEQRES and ATOM records:

>d5yikf1 d.15.1.1 (F:1-76) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

Timeline for d5yikf1:

• d5yikf1 is new in SCOPe 2.07-stable
  
• d5yikf1 appears in the current release, SCOPe 2.08