Lineage for d6fiib1 (6fii B:1-245)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2445156Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2445157Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families) (S)
    automatically mapped to Pfam PF00091
  5. 2445158Family c.32.1.1: Tubulin, GTPase domain [52491] (4 proteins)
  6. 2445283Protein automated matches [226837] (7 species)
    not a true protein
  7. 2445289Species Cow (Bos taurus) [TaxId:9913] [226564] (60 PDB entries)
  8. 3052904Domain d6fiib1: 6fii B:1-245 [352966]
    Other proteins in same PDB: d6fiia2, d6fiib2, d6fiic2, d6fiid2, d6fiie_, d6fiif1, d6fiif2, d6fiif3
    automated match to d4drxb1
    complexed with acp, ca, dms, gdp, gol, gtp, mes, mg, sg9

Details for d6fiib1

PDB Entry: 6fii (more details), 2.41 Å

PDB Description: tubulin-spongistatin complex
PDB Compounds: (B:) Tubulin beta-2B chain

SCOPe Domain Sequences for d6fiib1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6fiib1 c.32.1.1 (B:1-245) automated matches {Cow (Bos taurus) [TaxId: 9913]}
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneatgnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvmpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfp

SCOPe Domain Coordinates for d6fiib1:

Click to download the PDB-style file with coordinates for d6fiib1.
(The format of our PDB-style files is described here.)

Timeline for d6fiib1:

  • d6fiib1 appears in periodic updates to SCOPe 2.07 starting on 2018-05-31