Lineage for Protein: automated matches

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2929489Fold d.11: Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54183] (1 superfamily)
    alpha1-beta3; 2 layers: alpha/beta; order 132
  4. 2929490Superfamily d.11.1: Penicillin-binding protein 2x (pbp-2x), c-terminal domain [54184] (2 families) (S)
    duplication: consists of 2 subdomains of this fold
  5. 2929530Family d.11.1.0: automated matches [352956] (1 protein)
    not a true family
  6. 2929531Protein automated matches [352957] (2 species)
    not a true protein

Species:

  1. 2929532Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [353009] (2 PDB entries)
    1. Domains for 5oau:
      1. 2929533Domain d5oaua3: 5oau A:632-692 [353065]
        Other proteins in same PDB: d5oaua1, d5oaua2
        automated match to d1k25a1
      2. 2929534Domain d5oaua4: 5oau A:693-750 [353066]
        Other proteins in same PDB: d5oaua1, d5oaua2
        automated match to d1k25a2
    2. Domains for 5oj0:
      1. 2929535Domain d5oj0a3: 5oj0 A:632-692 [353010]
        Other proteins in same PDB: d5oj0a1, d5oj0a2
        automated match to d1k25a1
        complexed with 9wt
      2. 2929536Domain d5oj0a4: 5oj0 A:693-750 [353011]
        Other proteins in same PDB: d5oj0a1, d5oj0a2
        automated match to d1k25a2
        complexed with 9wt
  2. 2929537Streptococcus pneumoniae [TaxId:171101] [352958] (2 PDB entries)
    1. Domains for 5oiz:
      1. 2929538Domain d5oiza3: 5oiz A:632-692 [352981]
        Other proteins in same PDB: d5oiza1, d5oiza2
        automated match to d1k25a1
        complexed with 1s6
      2. 2929539Domain d5oiza4: 5oiz A:693-750 [352982]
        Other proteins in same PDB: d5oiza1, d5oiza2
        automated match to d1k25a2
        complexed with 1s6
    2. Domains for 5oj1:
      1. 2929540Domain d5oj1a3: 5oj1 A:632-692 [352959]
        Other proteins in same PDB: d5oj1a1, d5oj1a2
        automated match to d1k25a1
        complexed with 1s6, na
      2. 2929541Domain d5oj1a4: 5oj1 A:693-750 [352960]
        Other proteins in same PDB: d5oj1a1, d5oj1a2
        automated match to d1k25a2
        complexed with 1s6, na

More info for Protein automated matches from d.11.1.0: automated matches

Timeline for Protein automated matches from d.11.1.0: automated matches: