SCOPe 2.08: Domain d5ylyb2: 5yly B:721-863

Lineage for d5ylyb2 (5yly B:721-863)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.25: Ferredoxin reductase-like, C-terminal NADP-linked domain [52342] (1 superfamily)
   3 layers, a/b/a; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.25.1: Ferredoxin reductase-like, C-terminal NADP-linked domain [52343] (6 families)
   binds NADP differently than classical Rossmann-fold
   N-terminal FAD-linked domain contains (6,10) barrel

5. Family c.25.1.0: automated matches [227163] (1 protein)
   not a true family

6. Protein automated matches [226871] (19 species)
   not a true protein

7. Species Ulva prolifera [TaxId:3117] [352647] (1 PDB entry)

8. Domain d5ylyb2: 5yly B:721-863 [352667]
   Other proteins in same PDB: d5ylya1, d5ylyb1
   automated match to d1umka2
   complexed with fad

Details for d5ylyb2

PDB Entry: 5yly, 1.76 Å

PDB Description: crystal structure of the cytochrome b5 reductase domain of ulva prolifera nitrate reductase

PDB Compounds: (B:) nitrate reductase

SCOPe Domain Sequences for d5ylyb2:

Sequence; same for both SEQRES and ATOM records:

>d5ylyb2 c.25.1.0 (B:721-863) automated matches {Ulva prolifera [TaxId: 3117]}
pghyknhklesevkrinmiaggtgltpmyqvmkailsnpsdlteirllyanqteadillr
pelealakshpdrvkihytvdrptpgwkyssgfidldmceralfryepgtisvlcgpppm
lkfachpnlekmgfekgvtsief

Timeline for d5ylyb2:

• d5ylyb2 first appeared in SCOPe 2.07