Lineage for d5yirb_ (5yir B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2502275Family d.15.1.3: GABARAP-like [54253] (4 proteins)
    intracellular membrane trafficking and fusion proteins
    automatically mapped to Pfam PF02991
  6. 2502276Protein GABA(A) receptor associated protein GABARAP [69658] (3 species)
  7. 3052561Species Mus musculus [TaxId:10090] [352623] (2 PDB entries)
  8. 3052562Domain d5yirb_: 5yir B: [352624]
    automated match to d1gnua_
    complexed with ni

Details for d5yirb_

PDB Entry: 5yir (more details), 2.75 Å

PDB Description: crystal structure of ankb lir/gabarap complex
PDB Compounds: (B:) Gamma-aminobutyric acid receptor-associated protein

SCOPe Domain Sequences for d5yirb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yirb_ d.15.1.3 (B:) GABA(A) receptor associated protein GABARAP {Mus musculus [TaxId: 10090]}
mkfvykeehpfekrrsegekirkkypdrvpvivekapkarigdldkkkylvpsdltvgqf
yflirkrihlraedalfffvnnvipptsatmgqlyqehheedfflyiaysdesvygl

SCOPe Domain Coordinates for d5yirb_:

Click to download the PDB-style file with coordinates for d5yirb_.
(The format of our PDB-style files is described here.)

Timeline for d5yirb_:

  • d5yirb_ appears in periodic updates to SCOPe 2.07 starting on 2018-05-24