SCOPe 2.07: Domain d6dfub_: 6dfu B:

Lineage for d6dfub_ (6dfu B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)

5. Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 proteins)
   contains a conserved all-alpha subdomain at the C-terminal extension

6. Protein automated matches [190581] (10 species)
   not a true protein

7. Species Haemophilus influenzae [TaxId:71421] [352439] (1 PDB entry)

8. Domain d6dfub_: 6dfu B: [352440]
   automated match to d3n9ia_
   complexed with trp

Details for d6dfub_

PDB Entry: 6dfu, 2.05 Å

PDB Description: tryptophan--trna ligase from haemophilus influenzae.

PDB Compounds: (B:) Tryptophan--tRNA ligase

SCOPe Domain Sequences for d6dfub_:

Sequence, based on SEQRES records:

>d6dfub_ c.26.1.1 (B:) automated matches {Haemophilus influenzae [TaxId: 71421]}
akpivfsgvqpsgeltignylgalrnwvkmqedyecifcvvdlhaitvrqdpvalrkatl
dvlalylacgidpnkstifvqshvpehtqlswvlncytyfgemsrmtqfkdksaryaeni
nvglfdypvlmaadillyqaksvpvgddqkqhleitrdianrfnalygniftipeifigk
agarimslqdpekkmsksddnrnnvvtlledpksvakkikravtdsdeppvvrydvqnka
gvsnlldilsavtdkpiadlekefegkmyghlktavadevstllaslqerfhqyrndetl
ldnilrqgaekarakaqetlakvyeavgfvaak

Sequence, based on observed residues (ATOM records):

>d6dfub_ c.26.1.1 (B:) automated matches {Haemophilus influenzae [TaxId: 71421]}
akpivfsgvqpsgeltignylgalrnwvkmqedyecifcvvdlhaitvrqdpvalrkatl
dvlalylacgidpnkstifvqshvpehtqlswvlncytyfgemsrmtqfkdksaryaeni
nvglfdypvlmaadillyqaksvpvgddqkqhleitrdianrfnalygniftipeifigg
arimslqdpekkmsksddnrnnvvtlledpksvakkikravtdsdeppvvrydvqnkagv
snlldilsavtdkpiadlekefegkmyghlktavadevstllaslqerfhqyrndetlld
nilrqgaekarakaqetlakvyeavgfvaak

Timeline for d6dfub_:

• d6dfub_ is new in SCOPe 2.07-stable
  
• d6dfub_ appears in the current release, SCOPe 2.08