Lineage for d5yoyj1 (5yoy J:6-157)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2777171Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2777172Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2777173Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2777391Protein Tumor necrosis factor (TNF) [49848] (3 species)
  7. 2777392Species Human (Homo sapiens) [TaxId:9606] [49849] (33 PDB entries)
  8. 2777499Domain d5yoyj1: 5yoy J:6-157 [351958]
    Other proteins in same PDB: d5yoya2, d5yoyb2, d5yoyc2, d5yoyd_, d5yoye_, d5yoyf_, d5yoyg_, d5yoyh_, d5yoyi_, d5yoyj2, d5yoyk2, d5yoyl2, d5yoym_, d5yoyn_, d5yoyo_, d5yoyp_, d5yoyq_, d5yoyr_
    automated match to d1a8ma_

Details for d5yoyj1

PDB Entry: 5yoy (more details), 2.73 Å

PDB Description: crystal structure of the human tumor necrosis factor in complex with golimumab fv
PDB Compounds: (J:) Tumor necrosis factor

SCOPe Domain Sequences for d5yoyj1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5yoyj1 b.22.1.1 (J:6-157) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
rtpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfk
gqgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfq
lekgdrlsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5yoyj1:

Click to download the PDB-style file with coordinates for d5yoyj1.
(The format of our PDB-style files is described here.)

Timeline for d5yoyj1:

2777499
d5yoyj1 in context of chain
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Domains from same chain:
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d5yoyj2