Lineage for d6ck9l1 (6ck9 L:6-107)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. Protein automated matches [190740] (30 species)
    not a true protein
  7. Species Human (Homo sapiens) [TaxId:9606] [187920] (1747 PDB entries)
  8. Domain d6ck9l1: 6ck9 L:6-107 [351410]
    Other proteins in same PDB: d6ck9h2, d6ck9l2
    automated match to d1jvka1
    complexed with nag

Details for d6ck9l1

PDB Entry: 6ck9 (more details), 2.71 Å

PDB Description: crystal structure of hiv-1 conc_base0 prefusion env trimer in complex with human antibody fragment 3h109l and 35o22 variants at 3.5 angstrom
PDB Compounds: (L:) 3H109L Fab light chain

SCOPe Domain Sequences for d6ck9l1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6ck9l1 b.1.1.0 (L:6-107) automated matches {Human (Homo sapiens) [TaxId: 9606]}
syvrplsvalgetasiscgrqalgsravqwyqhrpgqapilliynnqdrpsgiperfsgt
pdinfgtratltisgveagdeadyychmwdsrsgfswsfggatrltvlg

SCOPe Domain Coordinates for d6ck9l1 are not available.

Timeline for d6ck9l1:

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Domains from same chain:
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d6ck9l2
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Domains from other chains:
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d6ck9d_, d6ck9e_, d6ck9h1, d6ck9h2