SCOPe 2.08: Domain d5xkgf2: 5xkg F:77-378

Lineage for d5xkgf2 (5xkg F:77-378)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311385] (176 PDB entries)

8. Domain d5xkgf2: 5xkg F:77-378 [351374]
   Other proteins in same PDB: d5xkga1, d5xkga2, d5xkgb1, d5xkgb2, d5xkgc1, d5xkgc2, d5xkgd1, d5xkgd2, d5xkge_, d5xkgf1, d5xkgf3
   automated match to d3tiia2
   complexed with 890, ca, gdp, gol, gtp, mes, mg

Details for d5xkgf2

PDB Entry: 5xkg, 2.2 Å

PDB Description: crystal structure of t2r-ttl-ch1 complex

PDB Compounds: (F:) tubulin tyrosine ligase

SCOPe Domain Sequences for d5xkgf2:

Sequence, based on SEQRES records:

>d5xkgf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d5xkgf2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptderevflaaynrrregregnvwialisseasel
ldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvlrtssepyn
sanfqdktchltnhciqknygryeegnemffeefnqylmdalnttlensillqikhiirs
clmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqklyaelcqgivdv
aissvfplatsifikl

Timeline for d5xkgf2:

• d5xkgf2 first appeared in SCOPe 2.07