Lineage for d5vqna1 (5vqn A:1-195)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. Superfamily c.52.1: Restriction endonuclease-like [52980] (37 families) (S)
  5. Family c.52.1.34: PA N-terminal domain [254166] (3 proteins)
    Pfam PF00603; relationship to endonucleases discussed in PubMed 19194458
  6. Protein PA N-terminal domain [254375] (8 species)
  7. Species Influenza A virus [TaxId:93838] [254808] (91 PDB entries)
  8. Domain d5vqna1: 5vqn A:1-195 [350941]
    Other proteins in same PDB: d5vqna2
    automated match to d4e5ed_
    complexed with mn, r07, so4; mutant

Details for d5vqna1

PDB Entry: 5vqn (more details), 2 Å

PDB Description: e119d mutant of 2009 h1n1 pa endonuclease in complex with ro-7
PDB Compounds: (A:) Polymerase acidic protein

SCOPe Domain Sequences for d5vqna1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vqna1 c.52.1.34 (A:1-195) PA N-terminal domain {Influenza A virus [TaxId: 93838]}
medfvrqcfnpmivelaekamkeygedpkietnkfaaicthlevcfmysdggskhrfeii
egrdrimawtvvnsicnttgvekpkflpdlydykenrfidigvtrrevhiyylekankik
sekthihifsftgeematkadytldeesrariktrlftirqemasrslwdsfrqse

SCOPe Domain Coordinates for d5vqna1 are not available.

Timeline for d5vqna1:

Domains from same chain:
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d5vqna2